WebPORD is a web-based pipeline to help you analyze RNA degradome-seq data
About WebPORD
WebPORD is an online RNA degradome-seq data analysis tool developed by the biological and computational scientists at Hallym University.
RNA degradome-seq is also know as PARE-seq (Parallel Analysis of RNA Ends-seq). It is originally developed to identify miRNA-mediated target mRNA cleavages at the genome-wide level (German et al., 2008 Nature Biotechnology).
degradome-seq (or PARE-seq) can be also utilized to analyze other types of RNA decay such as Nonsense-mediated RNA decay(NMD), endocleavage, decapping, and so on.
WebPORD is dedicated to processing the raw data, providing the mRNA decay values of each transcripts, and visualization of the mRNA decay patterns of each transcripts.
The interactive and graphic user interface makes the RNA degradome data analysis as easy as possible.
Work Flows